淡江大學機構典藏:Item 987654321/126151
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    題名: Comparative analysis of genetic risk scores for predicting biochemical recurrence in prostate cancer patients after radical prostatectomy
    作者: Hsieh, Ai-ru
    關鍵詞: Genetic risk score;Genome-Wide Association Study;Prostate cancer
    日期: 2024-07-02
    上傳時間: 2024-09-09 12:05:35 (UTC+8)
    摘要: Background
    In recent years, Genome-Wide Association Studies (GWAS) has identified risk variants related to complex diseases, but most genetic variants have less impact on phenotypes. To solve the above problems, methods that can use variants with low genetic effects, such as genetic risk score (GRS), have been developed to predict disease risk.

    Methods
    As the GRS model with the most incredible prediction power for complex diseases has not been determined, our study used simulation data and prostate cancer data to explore the disease prediction power of three GRS models, including the simple count genetic risk score (SC-GRS), the direct logistic regression genetic risk score (DL-GRS), and the explained variance weighted GRS based on directed logistic regression (EVDL-GRS).

    Results and Conclusions
    We used 26 SNPs to establish GRS models to predict the risk of biochemical recurrence (BCR) after radical prostatectomy. Combining clinical variables such as age at diagnosis, body mass index, prostate-specific antigen, Gleason score, pathologic T stage, and surgical margin and GRS models has better predictive power for BCR. The results of simulation data (statistical power = 0.707) and prostate cancer data (area under curve = 0.8462) show that DL-GRS has the best prediction performance. The rs455192 was the most relevant locus for BCR (p = 2.496 × 10–6) in our study.
    關聯: BMC Urology 24(1),　136
    DOI: 10.1186/s12894-024-01524-6
    顯示於類別:[統計學系暨研究所] 期刊論文

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